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Senior Citizen Health & Medicine

Discovery of Genes Involved in Lupus May Help Fight Autoimmune Disease

NEJM editorial highlights significance and limitations of the research

Jan. 21, 2008 - Some 1.5 million Americans, most of them women, suffer from lupus, a disease where the person’s immune system attacks the body’s own tissue. This week marks a significant step forward in understanding how the disease works with the online publication of four new studies identifying genes involved in this often debilitating chronic disease. It may also lead to learning more about other of these autoimmune diseases that primarily strike senior citizens.

 

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Mary K.Crow, M.D., associate chief of the division of Rheumatology and director of Rheumatology research at Hospital for Special Surgery in New York, has written an editorial in The New England Journal of Medicine to accompany the papers.

One study appears in The New England Journal of Medicine and the other three appear in Nature Genetics, all were published online on Jan. 20.

In her editorial, Dr. Crow talks about the importance of the studies and the questions they leave unanswered, along with insights on next steps in lupus research.

“Overall, these papers confirm what investigators have been finding over the past decades,” says Dr. Crow, the co-director of the Mary Kirkland Center for Lupus Research and director of the Autoimmunity and Inflammation Research Program at Hospital for Special Surgery.

“They show that many aspects of the immune system are involved in the development of the disease, but they also provide a new level of detail regarding the specific molecular pathways that contribute.”

 

The Study & Results

 
 

The researchers studied the DNA of 720 women of European descent with lupus and 2,337 women without lupus in a study supported by the Alliance for Lupus Research and the National Institutes of Health..

They scanned the entire genome for more than 317,000 single nucleotide polymorphisms (SNPs), which are locations on chromosomes where a single unit of DNA, or genetic material, may vary from one person to the next. The goal was to identify SNPs linked to lupus. They confirmed these results in another independent set of 1,846 women with lupus and 1,825 women without lupus.

The scientists found evidence of an association with multiple SNPs in three genes: ITGAM, KIAA1542 and PXK, and also at SNP rs10798269, which is not within any known gene.

ITGAM is important for both the adherence of immune cells and for cleaning up pathogens.

KIAA1542 is important for translating the DNA code into proteins. PXK encodes a molecule that transmits signals and controls complex processes in cells.

These scientists also found association in genes previously associated with lupus and other autoimmune diseases.

“These findings underscore that numerous genes, which are often immune-function related, contribute to the risk of developing lupus,” said Carl D. Langefeld, Ph.D., senior author from Wake Forest University School of Medicine and co-director of the International Consortium for Systemic Lupus Erythematosus Genetics .

The scientists are now focusing their attention on specific pathways and genes identified in this study, trying to dissect the precise molecular mechanisms by which these genes contribute to the risk for lupus. Genetic factors likely predict specific complications or patterns of complications. If so, it might be possible to intervene earlier in the process to delay or prevent their onset.

“This initial, important discovery will prove invaluable to all those affected by lupus,” said Barbara Boyts, president of the Alliance for Lupus Research, which supported the study and continues to support SLEGEN’s efforts to uncover genetic information about lupus. “We are hopeful that this information will lead to new and better treatment possibilities and, eventually, a cure for lupus.”

“Lupus is a decimating illness,” said John Harley, M.D., Ph.D., lead author and SLEGEN director, from the Oklahoma Medical Research Foundation. “As researchers, our goal is to reduce the burden of suffering caused by this disease. These findings have opened many new doors, and we’re excited to investigate what’s inside each of them.”

The findings, by scientists from Imperial College London and institutions in the USA and Sweden, will enable researchers to investigate the specific pathways and precise molecular mechanisms involved in developing Lupus, potentially opening up options for new therapies.

Other researchers in SLEGEN include: Marta E. Alarcon-Riquelme, M.D., Ph.D., the University of Uppsala in Sweden, Lindsey A. Criswell, M.D., MPH, the University of California at San Francisco, Chaim O. Jacob, M.D., Ph.D., the University of Southern California, Betty P. Tsao, Ph.D., the University of California at Los Angeles, Robert P. Kimberly, M.D., the University of Alabama at Birmingham, Kathy L. Moser, Ph.D., the Oklahoma Medical Research Foundation, and Timothy J. Vyse, M.D., Ph.D., the Imperial College in London.

(www.SLEGEN.org)

 

The new research looks at how variations in a single DNA base pair, called single nucleotide polymorphisms (SNP), can be used to identify genetic variations among individuals that are associated with a diagnosis of lupus. In some cases, the SNPs call attention to important genes but have no apparent functional importance themselves.

In other cases, the variations might actually change the protein product so that it functions differently in lupus patients and healthy individuals.

For example, in one specific gene the frequency of an “A” nucleotide in people with lupus might be significantly greater than in healthy individuals without the disease. This small variation may alter the expression or function of the protein encoded by that gene in a way that contributes to the disease.

Two of the studies are comprehensive reports of genomewide analyses looking for these types of small changes, specifically for those that appear more frequently in lupus patients and could predispose them to the disease.

A third study also used a total genome analysis but focuses on those SNPs that are predicted to change the amino acid sequence of the protein product, meaning there is a greater chance the resulting protein’s expression, role or activity is changed. The fourth study centers around one gene in particular, called ITGAM.

“These genetic studies are the first step in getting a detailed understanding of the molecular pathways that underlie lupus,” says Dr. Crow. The results help direct researchers to the genes, molecules and cells that are directly involved in the disease so that they can eventually identify exactly which pathways they can target therapeutically.

Dr. Crow was particularly intrigued by the research on ITGAM, whose association with lupus was supported by three of the new studies. The protein encoded by ITGAM is found on the immune system’s white blood cells that are recruited to blood vessels when it is activated.

Some of the characteristic clinical features of lupus involve changes in blood vessels, including alterations in the kidneys, eyes, skin and the premature atherosclerosis that is common in lupus patients.

The ITGAM protein, which is an adhesion molecule, helps leukocytes adhere to the cells lining blood vessels. The new genetic analysis of ITGAM variations associated with the disease predicts that it may promote vascular inflammation.

“The role of the target tissue, such as the blood vessels, had been prominent in early lupus research,” says Dr. Crow, “but in the past 25 to 30 years the focus has been primarily on the immune system. The new research on ITGAM, I think, will help redirect the attention of the scientific community back to this aspect of the disease.”

While the immune system, as the attacker, is of central importance in disease pathogenesis, it is also necessary to look at the response of the tissues they are attacking, Dr. Crow explains.

Dr. Crow also praised the impressive collaborative effort that was required to complete the reported studies. For one of the studies, the International Consortium for Systemic Lupus Erythematosus Genetics (SLEGEN) coordinated the planning and organization of a large genotyping and data analysis effort that involved contributions from more than 150 participants.

While some investigator groups have the patient numbers and financial support to provide important new genetics data independently, the success of the SLEGEN study supports broad collaboration, with credit shared among the many essential contributors, as a model that could be followed in investigation of the genetic factors in other complex diseases.

However, three of the four studies, including both large genomewide association studies, are also missing a critical component – they don’t take into account the populations of people that have the highest morbidity and mortality from the disease.

“In the major studies, all of the subjects were of European descent,” says Dr. Crow, “but lupus is most severe in people with African, Asian and Hispanic backgrounds. We need to confirm that these same genes are involved in all of our patient populations and identify any distinct genes that might be involved in those populations at greatest risk for poor outcomes.”

 

About the Disease

 
 

Your body's immune system protects you from disease and infection. But if you have an autoimmune disease, your immune system attacks itself by mistake. Autoimmune diseases can affect many parts of the body. These diseases tend to run in families. Women - particularly African-American, Hispanic-American, and Native-American women - have a higher risk for some autoimmune diseases.

There are more than 80 types of autoimmune diseases, and some have similar symptoms. This makes it hard for your health care provider to know if you really have one of these diseases, and if so, which one. Getting diagnosed can be frustrating and stressful. In many people, the first symptoms are being tired, muscle aches and low fever. Read more at MedlinePlus...

Lupus

Also called: Discoid lupus, Subacute cutaneous lupus, Systemic lupus erythematosus

If you have lupus, your immune system attacks healthy cells and tissues by mistake. This can damage your joints, skin, blood vessels and organs. There are many kinds of lupus. The most common type, systemic lupus erythematosus, affects many parts of the body. Discoid lupus causes a rash that doesn't go away. Subacute cutaneous lupus causes sores after being out in the sun. Another type can be caused by medication. Neonatal lupus, which is rare, affects newborns.

Anyone can get lupus, but women are most at risk. Lupus is also more common in African American, Hispanic, Asian and Native American women. The cause of lupus is not known. Read more at MedlinePlus...

 

Editor’s Notes:

Hospital for Special Surgery has been a leader for more than forty years in research into the underlying mechanisms of lupus and was the nation’s first National Institutes of Health-sponsored Specialized Center of Research in lupus. The Mary Kirkland Center for Lupus Research at HSS combines novel research with patient programs to provide the best care for its lupus patients.

Dr. Crow has studied the immunologic mechanisms responsible for lupus for many years. Her recent research has looked at the role of a family of molecules, the interferons, in lupus, their association with disease activity and the mechanisms of type I interferon production. Her recent findings from studies of lupus families have shown that increased interferon-alpha levels are a heritable risk factor for lupus.

All Hospital for Special Surgery medical staff are on the faculty of Weil Cornell Medical College. The hospital’s research division is internationally recognized as a leader in the investigation of musculoskeletal and autoimmune diseases. Hospital for Special Surgery is located in New York City and online at www.hss.edu.

 

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